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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs16913477 chr12:9812413 C/T LOC374443 chr12:9786015-9811008:+ 1.02 5.34 2.1E-6 Box Plot
ACC rs1692182 chr1:213090297 A/C LQK1 chr1:213029947-213031480:- 0.68 6.55 2.55E-8 Box Plot
ACC rs16943076 chr18:2336477 A/G MYL12B chr18:3261907-3278282:+ 1.34 5.18 3.61E-6 Box Plot
ACC rs16948590 chr17:45908551 G/C SP6 chr17:45922274-45933240:- 0.62 5.4 1.65E-6 Box Plot
ACC rs16959755 chr16:58202089 T/C CSNK2A2 chr16:58191811-58231824:- 0.64 5.33 2.16E-6 Box Plot
ACC rs170091 chr1:64053568 G/T ITGB3BP chr1:63906441-64059392:- 0.65 7 5.01E-9 Box Plot
ACC rs17056127 chr18:72711522 A/G C18orf55 chr18:71815746-71826204:+ 1.31 5.12 4.53E-6 Box Plot
ACC rs17091938 chr14:74283149 T/C LIN52 chr14:74551499-74667938:+ 0.46 5.2 3.43E-6 Box Plot
ACC rs17091941 chr14:74283202 A/G LIN52 chr14:74551499-74667938:+ 0.46 5.24 2.97E-6 Box Plot
ACC rs1709474 chr7:64561863 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs1709475 chr7:64562410 G/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs1709476 chr7:64562912 G/C INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs1709515 chr7:64551864 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs17101458 chr14:64387065 G/C SYNE2 chr14:64319701-64693151:+ 1.01 5.25 2.85E-6 Box Plot
ACC rs1711189 chr20:44381973 A/G WFDC3 chr20:44376583-44420571:- 0.9 6.48 3.38E-8 Box Plot